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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4073948 chr8:10772644 A/T SGK223 chr8:8175258-8244008:- 0.35 7.16 3.13E-12 Box Plot
THCA rs4076491 chr8:11825576 C/G SGK223 chr8:8175258-8244008:- 0.36 6.61 1.02E-10 Box Plot
THCA rs4076492 chr8:11825524 T/C SGK223 chr8:8175258-8244008:- 0.35 6.47 2.36E-10 Box Plot
THCA rs4076493 chr8:11825521 T/C SGK223 chr8:8175258-8244008:- 0.35 6.48 2.28E-10 Box Plot
THCA rs4077563 chr3:125769757 A/G ROPN1 chr3:123687368-123711025:- -0.34 -6.2 1.25E-9 Box Plot
THCA rs4082836 chr5:49740270 G/A LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs4086089 chr2:132216909 G/A CCDC74B chr2:130896860-130902707:- 0.39 7.01 7.98E-12 Box Plot
THCA rs4097528 chr11:49141664 A/T FOLH1B chr11:89372395-89431886:+ 0.46 7.73 6.59E-14 Box Plot
THCA rs4109 chr6:57212948 T/C GUSBL2 chr6:58246159-58287724:- -0.3 -5.96 4.78E-9 Box Plot
THCA rs4110144 chr2:132210038 T/A CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.68E-11 Box Plot
THCA rs4116428 chr2:92192886 G/A ZNF514 chr2:95813075-95831158:- -0.32 -6.34 5.27E-10 Box Plot
THCA rs412212 chr21:43993643 A/G TLN1 chr9:35696945-35732392:- -0.24 -6.23 1.0E-9 Box Plot
THCA rs4123593 chr11:77669985 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 11.38 1.04E-26 Box Plot
THCA rs4123595 chr11:77670112 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 11.35 1.3E-26 Box Plot
THCA rs4126052 chr15:31088969 C/T CHRNA7 chr15:32215641-32465219:+ 0.29 6.6 1.08E-10 Box Plot